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SeqCode@LDClab
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What is SeqCode?
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OTHER SITES
AweIcons
BootStrap
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ColorBrewer
DESeq2
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EnhancedVolcano
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ggpubr
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BASIC CONFIGURATION
Upload the input file
Set the working mode
(1) DESeq2 file
(2) Tabular file
Choose the number of genes to assign labels
0
1
2
3
4
5
6
7
8
9
10
OPTIONAL:
List of elements to be highlighted
Terms:
(Tabular files) Names of fields for X axis and Y axis
Field descriptors in your tabular file:
FINE TUNNING
Captions and titles
Title:
Subtitle:
Label for X axis:
Label for Y axis:
Graphical parameters
FC cutoff:
P value cutoff:
10
5
2
1.5
1
1e-50
1e-20
1e-10
1e-05
1e-02
Point size:
Label element size:
5
3
2
1
0.5
20
10
5
3
2
1
NS class color:
FC class color:
Pvalue class color:
FC and P value class color:
Legend position:
Alpha coefficient:
top
bottom
left
right
none
1
0.75
0.5
0.25
0
Labels in Bold:
Labels in Italics:
yes
no
true
false
Boxed labels?
Show connectors?
Yes
No
yes
No
Legend size:
Horizontal plot?
20
15
10
5
1
Yes
No
Background color:
Foreground color:
The full map of R colors is
here